Chrono-metabolomics · a public series

Your biology
runs on time

The same molecule that looks dangerously low at 2 am can be perfectly normal at 8 am — in the same person. This series explores why, starting from the very beginning. No assumed knowledge. Just the science, made human.

~50%
of your plasma metabolites
oscillate on a 24-hour rhythm
630
metabolites measurable
from a single blood drop
12
chapters building
from first principles
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How much of your metabolome oscillates?
Acylcarnitines
~88%
Phospholipids
~74%
Amino acids
~61%
Bile acids
~55%
Biogenic amines
~40%
% of each class showing 24-hour rhythmicity in plasma · Dallmann et al., PNAS 2012
What this is — and who it's for
Science that connects to real life
The gap in the science
Metabolomics studies routinely ignore what time it is

Blood is drawn at 9 am in one lab, 2 pm in another. Participants fast for 8 hours in one study, 14 hours in the next. Nobody records whether the subject slept well, saw morning light, or had shift work the night before. Then we wonder why biomarker findings don't replicate.

This is not a minor methodological nuisance. Half of your circulating metabolites oscillate with the time of day. The molecule that flags as "low" on your blood test might simply be at its natural trough — a rhythm your body has run every night for decades.

  • ~50% of circulating metabolites follow a 24-hour rhythm in healthy people
  • The same metabolite can vary 2–3 fold across the day in a single individual
  • Shift work disrupts the metabolome measurably within days — even when diet is identical
  • Most clinical studies still don't record time of blood draw as a variable
"Metabolomics studies performed at a single time point provide only a static glimpse of metabolism — and depending on the time selected, may easily miss the bigger picture."— Eckel-Mahan et al., Frontiers in Neuroscience, 2017
What this series does differently
Building from first principles — and connecting every concept to the body you live in

This is not a journal club. It's not a textbook. It's a structured series written by someone who works in this field and got tired of explaining it from scratch every time — so decided to do it once, properly, in public.

Every chapter starts with the science. Then it asks: what does this actually mean for the person trying to understand their fatigue, their cortisol, their sleep, their metabolic health? The research doesn't live in a vacuum. Neither should the explanation.

  • Start at the beginning: what is a metabolite, and why does it matter?
  • Compare metabolomics to genomics, transcriptomics, proteomics — where it fits and what it adds
  • Introduce chronobiology: the molecular clock, zeitgebers, circadian vs diurnal rhythms
  • Go deep on individual metabolites from the Biocrates platform — what they are, when they peak, why it matters
  • Close honestly: what the evidence shows, and where the field still has gaps

Written for researchers, clinicians, coaches, and anyone who wants to understand metabolism at a level deeper than "eat less, move more."

Articles
Start from chapter one

Each article builds on the last. Read in order for the full picture, or jump to whatever interests you most.

Chapter roadmap
Where we're going, step by step

The series is designed to be read in order. Each chapter builds on the last. Here is the full plan.

    Publishing cadence
    Two science articles per week — consistently

    Sundays for deeper, conceptual reads. Thursdays for data-forward content. Coaching days on Tuesday and Friday stay completely separate.

    Mon
    Rest
    Tue
    🎯
    Coach
    Wed
    Write
    Thu
    🧬
    Post
    Fri
    🎯
    Coach
    Sat
    Write
    Sun
    🧬
    Post
    Why this timing

    Sunday reaches readers in slower, reflective mode — ideal for longer conceptual articles. Thursday hits mid-week when professionals are most engaged. Keeping coaching days separate protects your identity as an educator.

    About this series
    Written by someone who lives
    at the intersection of these fields

    I work in chrono-metabolomics research and I also work with people — real people trying to understand why they feel the way they feel, why their labs look the way they look, why doing "all the right things" sometimes doesn't produce the results they expect.

    What I've found is that most of the missing piece is time. Not more sleep, not different food — but the recognition that when things happen in the body matters as much as what happens. Your cortisol at 6 am and your cortisol at 6 pm are not the same signal. Your tryptophan after a bad night looks nothing like your tryptophan after a good one. The body is not static. It is a rhythm.

    This series is my attempt to make that legible — from the molecular level up. Rigorous enough to be useful to researchers and clinicians. Human enough that anyone paying attention to their health can follow along and actually use it.

    Chrono-metabolomicsTargeted metabolomics Biocrates platformCircadian biology Biochemical pathwaysTime-series design ChronobiologyApplied metabolism
    CM
    ChronoMetabolomics
    Researcher · Educator · Coach
    What every article commits to
    • Start from first principles — no jargon without explanation
    • Every claim backed by primary literature, linked directly
    • Connect the science to what it means for the body you live in
    • Be honest about what we don't know — the gaps matter too
    • Stay free. Always. No paywalls, no gated content.
    Get each chapter when it lands
    Follow the series
    as it unfolds

    New chapters publish regularly. Each one builds on the last — subscribe and you'll never lose the thread. No noise, no newsletters-about-newsletters. Just the science, when it's ready.

    Always free
    Studies linked in every article
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    ChronoMetabolomics
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